Trinity combines three independent software modules: Inchworm, Chrysalis, and Butterfly, applied sequentially to process large volumes of RNA-seq reads. Trinity partitions the sequence data into many individual de Bruijn graphs, each representing th
The main featues are; * Inputs are simple FASTA contig sequences as well as (multiple) FASTA/FASTQ paired-read data * High-quality scaffolds in a short runtime and limited memory requirements * High reduction of the amount of contigs stored into sca
Gitpod RNAseq STAR管线-Chr22 Simulado
预先安装
brew install r
下载dos Apss（STAR e RSEM）
阅读后请参阅STAR e RSEM para alinhamento e contagem。
执行脚本run.down.apps.sh
sh run.down.apps.sh
推荐给chr22的chr22
执行脚本makeRef.sh
cd reference
sh makeRef.sh
执行者STAR e RSEM
执行脚
